[AMBER-Developers] parallel AT compile failure

From: Jason Swails <jason.swails.gmail.com>
Date: Wed, 13 Oct 2010 10:06:41 -0400

Hello,

Trying to compile AmberTools in parallel from the fresh git checkout
resulted in the following error message:

-- snip --
a - /Users/swails/newamber/current/amber/lib/temp/*
ar: /Users/swails/newamber/current/amber/lib/temp/*: No such file or
directory
a - /Users/swails/newamber/current/amber/lib/pbsatemp/__.SYMDEF SORTED
a - /Users/swails/newamber/current/amber/lib/pbsatemp/decomp.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/dsvdc.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/interface.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/myopen.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/np_force.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_direct.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_exmol.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_force.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_init.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_list.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_lsolver.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_mpfrc.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_nlsolver.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_read.LIBPBSA.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pb_write.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/pbsaapi.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/rfree.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/rgroup.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/sa_driver.o
a - /Users/swails/newamber/current/amber/lib/pbsatemp/timer.o
make[1]: *** [libnab.a] Error 1
make: *** [parallel] Error 2

Specs: Mac OS X 10.6.4/ gcc 4.4.5 (macports)/ mpich2-1.2.1b

Perhaps "clean" was a little to proactive in removing libraries that should
have (but were not) rebuilt? I didn't look into the error too deeply since
I have no real need for parallel AT.

All the best,
Jason

-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Wed Oct 13 2010 - 07:30:10 PDT
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