Re: [AMBER-Developers] sander.MPI tests randomly stall in Ubuntu 9.10

From: Lachele Foley <lfoley.ccrc.uga.edu>
Date: Wed, 12 May 2010 11:36:08 -0400

> Just to be sure, in your case, the hang happens *only* in the parallel
> version, right? Do all serial tests pass just fine?

Yes. They aren't "fine", exactly, but they aren't awful:

=====================================================
Finished serial test suite for Amber 11 at Tue May 11 15:17:06 EDT 2010.

make[1]: Leaving directory `/usr/local/amber11_20100507/test'
394 file comparisons passed
13 file comparisons failed
       1 test experienced an error
=====================================================

I'm having trouble figuring out which test experienced an error. I'm guessing it's the DFTB set that all say "X not found - Skipping Test"

The failures are all from the ncsu set:
$ grep -A2 FAILURE 2010-05-11_14-17-27.diff | grep amber11_20100507
/usr/local/amber11_20100507/test/ncsu/abmd_ANALYSIS
/usr/local/amber11_20100507/test/ncsu/abmd_ANALYSIS
/usr/local/amber11_20100507/test/ncsu/abmd_FLOODING
/usr/local/amber11_20100507/test/ncsu/abmd_FLOODING
/usr/local/amber11_20100507/test/ncsu/abmd_FLOODING
/usr/local/amber11_20100507/test/ncsu/abmd_UMBRELLA
/usr/local/amber11_20100507/test/ncsu/abmd_UMBRELLA
/usr/local/amber11_20100507/test/ncsu/smd
/usr/local/amber11_20100507/test/ncsu/smd
/usr/local/amber11_20100507/test/ncsu/pmd
/usr/local/amber11_20100507/test/ncsu/pmd
/usr/local/amber11_20100507/test/ncsu/smd2
/usr/local/amber11_20100507/test/ncsu/smd2


> On Tue, May 11, 2010 at 5:41 PM, Lachele Foley <lfoley.ccrc.uga.edu> wrote:
> > Yes, using gcc44/g++44/gfortran44, etc., all 4.4.0, we still get the hang
> on the same neb test.

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Received on Wed May 12 2010 - 09:00:03 PDT
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