Re: [AMBER-Developers] 28 Mar release candidates for Amber11/AmberTools-1.4

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Mon, 29 Mar 2010 17:08:01 -0400

On Mon, Mar 29, 2010 at 3:40 PM, case <case.biomaps.rutgers.edu> wrote:

> On Mon, Mar 29, 2010, Daniel Roe wrote:
>
> > Another thing I just noticed is that the chamber subdirectory does not
> > appear to be present under $AMBERHOME/test, which causes the pmemd serial
> > and parallel tests to stop.
>
> Will be fixed in the next release. For now, could you try the following:
>
> cd $AMBERHOME/test
> mkdir chamber
> cd ../../test/chamber
> mv md_engine ../../../test/chamber
>

Creating a symbolic link from $AMBERHOME/AmberTools/test/chamber to
$AMBERHOME/test/chamber works as well.


> >
> > On Mon, Mar 29, 2010 at 2:39 PM, Daniel Roe <daniel.r.roe.gmail.com>
> wrote:
> >
> > > Here are my current test results:
> > >
> > > Linux case1 2.6.18-164.11.1.el5 #1 SMP Wed Jan 20 07:32:21 EST 2010
> x86_64
> > > x86_64 x86_64 GNU/Linux
> > > icc (ICC) 10.1 20090817
> > > ifort (IFORT) 10.1 20090817
>
> a. what machine is this really?
>

The machine that was ordered for me, called case1; the OS is a Linux x86_64
Centos 2.6.18-164.11.1.el5, CPU is intel core i7-860.


> b. can you post this to the wiki?
>

Posting now. I will also post my results for CYGWIN/i686/gnu 4.3.4.

-Dan

-- 
-------------------------
Daniel R. Roe
Postdoctoral Associate
SAS - Chemistry & Chemical Biology
610 Taylor Road
Piscataway, NJ   08854
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Received on Mon Mar 29 2010 - 14:30:04 PDT
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