Re: [AMBER-Developers] infinite ptraj.MPI, was: First AmberTools release candidate

From: case <case.biomaps.rutgers.edu>
Date: Wed, 17 Mar 2010 07:43:57 -0400

On Tue, Mar 16, 2010, Lachele Foley wrote:
>
> > I wouldn't be surprised if it did turn out to be a FS issue - even simple
> > NFS mount points can get really wacky sometimes (same file has different
> > contents/attributes on different computers etc). For now I would say avoid
> > using ptraj over any network filesystem in parallel.
>
> ...or sander, pmemd...

??? Neither sander nor pmemd do parallel i/o, as far as I can see.

Does your problem exist with netcdf trajectories?

...dac


_______________________________________________
AMBER-Developers mailing list
AMBER-Developers.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber-developers
Received on Wed Mar 17 2010 - 05:00:03 PDT
Custom Search