============ Step 1 ============

Info: the atom number exceeds the MAXATOM, reallocate memory automatically
---Judge bond type for Residue 1 with ID of 0 and Name of MET ---

---Judge bond type for Residue 2 with ID of 1 and Name of GLN ---

---Judge bond type for Residue 3 with ID of 2 and Name of HIS ---

Info: Bond types are assigned for valence state 17 with penalty of 1

---Judge bond type for Residue 4 with ID of 3 and Name of HIS ---

Info: Bond types are assigned for valence state 17 with penalty of 1

---Judge bond type for Residue 5 with ID of 4 and Name of GLY ---

---Judge bond type for Residue 6 with ID of 5 and Name of VAL ---

---Judge bond type for Residue 7 with ID of 6 and Name of THR ---

---Judge bond type for Residue 8 with ID of 7 and Name of LYS ---

---Judge bond type for Residue 9 with ID of 8 and Name of CYS ---

Info: Bond types are assigned for valence state 60 with penalty of 2

---Judge bond type for Residue 10 with ID of 9 and Name of ASN ---

---Judge bond type for Residue 11 with ID of 10 and Name of ILE ---

---Judge bond type for Residue 12 with ID of 11 and Name of THR ---

The frozen atom type can only be 1, 2, 3, 7 (aromatic single), 8 (aromatic double)Error: cannot run "/Applications/Amber11/gnu/bin/bondtype -j full -i ANTECHAMBER_BOND_TYPE.AC0 -o ANTECHAMBER_BOND_TYPE.AC -f ac" in judgebondtype() of antechamber.c properly, exit

The atom number exceeds the MAXATOM, reallocate memory
Info: the bond number exceeds MAXBOND, reallocate memory automatically
Running: /Applications/Amber11/gnu/bin/bondtype -j full -i ANTECHAMBER_BOND_TYPE.AC0 -o ANTECHAMBER_BOND_TYPE.AC -f ac