Ah, I should have read more carefully-- are you sure that TESTsander is
properly set to sander.MPI?
On Thu, Oct 22, 2009 at 12:24 PM, Jason Swails <jason.swails.gmail.com>wrote:
> Ben,
>
> sander cannot take -ng. Only sander.MPI can.
>
> -Jason
>
>
> On Thu, Oct 22, 2009 at 12:16 PM, Ben Roberts <roberts.qtp.ufl.edu> wrote:
>
>> Hi all,
>>
>> When running the parallel sander tests at the moment, I'm getting a large
>> number of failures of the following kind:
>>
>> mdfil: Error unknown flag: -ng
>>
>> usage: sander [-O|A] -i mdin -o mdout -p prmtop -c inpcrd -r restrt
>> [-ref refc -x mdcrd -v mdvel -e mden -idip inpdip -rdip rstdip -mdip mddip
>> -ng numgroup -remlog remlog -rem [0|1|2] -inf mdinfo -radii radii -y
>> inptraj]
>> Consult the manual for additional options.
>>
>>
>> Has the -ng functionality been removed, or does this message indicate a
>> compilation error at my end?
>>
>> Thanks,
>> Ben
>>
>> _______________________________________________
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>> AMBER-Developers.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber-developers
>>
>
>
>
> --
> ---------------------------------------
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
>
--
---------------------------------------
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Thu Oct 22 2009 - 09:30:05 PDT
